1) Get the dependencies (including Bazaar which you need to download the source code)
sudo apt-get install bzr2) Download the source code
sudo apt-get build-dep gnome-do
sudo apt-get build-dep gnome-do-plugins
bzr branch lp:do gnome-do3) Install (do this for both of the new directories)
bzr branch lp:do-plugins
cd gnome-do4) Restart gnome-do and enable GNOME Session Management plugin
./autogen.sh
make
sudo make install
Note: I actually left the old repo versions installed, in the hope that there may be some dependencies fulfilled. Hopefully this wont cause any headaches in the future (it hasn't so far).